Jesko Wagner
PhD student of bioinformatics at University of Edinburgh
I am a PhD student at Edinburgh University, looking to find new treatments for glioblastoma by improving drug profiling. Specifically, I work with high-throughput morphological screens from which I extract biologically interpretable results.
My previous research projects spanned everything from (epi-)genomics, over single-cell analysis to machine-learning. In the process, I investigated DNA fragility, predicted gene pathway defects from genetic scars, and found changes in epigenetic states from single-cell MNase-seq data. Throughout this time I gathered experience in best practices in data science, developed skills in machine-learning, and learned a lot about assessing omics through sequencing.
Want to learn more? Feel free to get in touch, I am always happy to chat over an informal coffee. You can find my contact details by clicking on one of the buttons on the top left.
Current and past affiliations
Date | Supervisor | Institute | Role | Project |
---|---|---|---|---|
Aug. 2021 – current | Sjoerd Beentjes, Ava Khamseh | University of Edinburgh. Institute of Cancer and Genomics. | PhD Student | Drug profiling in glioblastoma |
Mar. 2021 – Aug. 2021 | Jan Korbel | EMBL Heidelberg. Unit of Genome Biology. | Research Intern | Strand-seq |
Dec. 2020 – Feb. 2021 | Stein Aerts | VIB-KU Leuven. | Literature Research Intern | |
Dec. 2019 – Nov. 2020 | Jeroen de Ridder & Edwin Cuppen | UMC Utrecht. Center for Molecular Medicine. | Master Thesis Intern | SVs in cancer |
Feb. 2021 – Sep. 2019 | Nicola Crosetto | Karolinska Institutet. SciLifeLab. | Research Intern | BLISS |